CIMAC pixel clustering - compare calibration
Candace Liu
December 16, 2020
- Gaussian blur sigma=2
- Convert to frequencies (normalize to pixel total)
- Normalize with or without calibration channel, or divide by calibration
- z-score cap=3
- k=20
All clusters
R6C7
With calibration channel
No calibration channel
Div calibration channel
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
No normalization
R2C10
With calibration channel
No calibration channel
Div calibration channel
No normalization
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
R8C9
With calibration channel
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
No calibration channel
Div calibration channel
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
No normalization
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
R3C2
With calibration channel
No calibration channel
Div calibration channel
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
No normalization
## geom_path: Each group consists of only one observation. Do you need to adjust
## the group aesthetic?
SD and CV
